PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009777388.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 195aa    MW: 21845.7 Da    PI: 8.7856
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009777388.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.52.9e-1756106255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y GVr ++ +g+++AeIrd + ng   r++lg+f +aeeAa a+++ +++++g
  XP_009777388.1  56 HYIGVRTRP-WGKYAAEIRDSTRNG--IRVWLGTFNSAEEAAMAYDQVALSMRG 106
                     799***999.**********44465..*************************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.31E-2655115No hitNo description
SuperFamilySSF541711.77E-2156116IPR016177DNA-binding domain
PROSITE profilePS5103220.5656114IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.4E-2856115IPR001471AP2/ERF domain
SMARTSM003802.3E-3156120IPR001471AP2/ERF domain
PfamPF008471.2E-1156106IPR001471AP2/ERF domain
PRINTSPR003671.1E-85768IPR001471AP2/ERF domain
PRINTSPR003671.1E-88096IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MDVKIQDEKH ASNICVAGEV EVELSSLEDA SSSKISLKEI KKNDFSSKRP QNAEKHYIGV  60
RTRPWGKYAA EIRDSTRNGI RVWLGTFNSA EEAAMAYDQV ALSMRGPSTC LNFPVERVRK  120
MLQETECNFL KNGLSPAAAL KEKHKKRSSS SGSTTASIKK GKKKQVNKED NIVFIFEDLG  180
TDLLDELLSE YSSFY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A4e-2655115464ATERF1
2gcc_A4e-2655115464ATERF1
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754445e-90HG975444.1 Solanum pennellii chromosome ch05, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009777388.11e-144PREDICTED: ethylene-responsive transcription factor 15-like
RefseqXP_016467384.11e-144PREDICTED: ethylene-responsive transcription factor 15-like
SwissprotQ8LDC89e-44ERF92_ARATH; Ethylene-responsive transcription factor 1B
TrEMBLK4C1E93e-76K4C1E9_SOLLC; Uncharacterized protein
STRINGSolyc05g051180.1.19e-76(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.11e-36ethylene response factor 1